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Cofit
Protein
Homologs
Top cofit genes for GFF3772 from
Variovorax sp. SCN45
Arginase (EC 3.5.3.1)
SEED: Arginase (EC 3.5.3.1)
KEGG: arginase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7253
Mobile element protein
no
0.69
2
GFF1682
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
no
0.67
3
GFF4429
Inner membrane protein YpjD
no
0.67
4
GFF6706
ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92)
no
0.66
5
GFF1553
no description
no
0.64
6
GFF2127
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
no
0.62
7
GFF4166
Cytidine deaminase (EC 3.5.4.5)
no
0.62
8
GFF2363
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52)
no
0.61
9
GFF4824
Transcriptional regulator, AraC family
no
0.58
10
GFF5196
L-arabinose ABC transporter, permease protein AraH
0.27
0.58
11
GFF4991
Polyhydroxyalkanoate granule-associated protein PhaF
no
0.57
12
GFF2220
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.57
13
GFF2476
Tripartite tricarboxylate transporter TctB family
no
0.56
14
GFF2355
A/G-specific adenine glycosylase (EC 3.2.2.-)
0.40
0.56
15
GFF3018
VgrG protein
no
0.56
16
GFF7328
no description
no
0.55
17
GFF5721
Flagellar L-ring protein FlgH
no
0.55
18
GFF1765
putative membrane protein
no
0.55
19
GFF3156
FIG00441737: hypothetical protein
no
0.55
20
GFF2631
Transcriptional regulator, ArsR family
no
0.54
Or look for
negative cofitness