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  • Top cofit genes for GFF3772 from Variovorax sp. SCN45

    Arginase (EC 3.5.3.1)
    SEED: Arginase (EC 3.5.3.1)
    KEGG: arginase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7253 Mobile element protein no 0.69
    2 GFF1682 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.67
    3 GFF4429 Inner membrane protein YpjD no 0.67
    4 GFF6706 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no 0.66
    5 GFF1553 no description no 0.64
    6 GFF2127 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.62
    7 GFF4166 Cytidine deaminase (EC 3.5.4.5) no 0.62
    8 GFF2363 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52) no 0.61
    9 GFF4824 Transcriptional regulator, AraC family no 0.58
    10 GFF5196 L-arabinose ABC transporter, permease protein AraH 0.27 0.58
    11 GFF4991 Polyhydroxyalkanoate granule-associated protein PhaF no 0.57
    12 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.57
    13 GFF2476 Tripartite tricarboxylate transporter TctB family no 0.56
    14 GFF2355 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.40 0.56
    15 GFF3018 VgrG protein no 0.56
    16 GFF7328 no description no 0.55
    17 GFF5721 Flagellar L-ring protein FlgH no 0.55
    18 GFF1765 putative membrane protein no 0.55
    19 GFF3156 FIG00441737: hypothetical protein no 0.55
    20 GFF2631 Transcriptional regulator, ArsR family no 0.54

    Or look for negative cofitness