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  • Top cofit genes for PS417_19305 from Pseudomonas simiae WCS417

    acireductone dioxygenase
    SEED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54)
    KEGG: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) 0.64 0.27
    2 PS417_07575 multifunctional fatty acid oxidation complex subunit alpha 0.62 0.26
    3 PS417_17395 MFS transporter no 0.24
    4 PS417_01265 CbbBc protein 0.23 0.24
    5 PS417_23385 cytochrome o ubiquinol oxidase subunit I 0.30 0.22
    6 PS417_20775 coproporphyrinogen III oxidase no 0.21
    7 PS417_03230 TetR family transcriptional regulator no 0.21
    8 PS417_00710 fusaric acid resistance protein 0.24 0.21
    9 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) 0.75 0.21
    10 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.73 0.20
    11 PS417_18115 gamma-glutamyltransferase no 0.20
    12 PS417_20920 D-alanyl-D-alanine carboxypeptidase 0.76 0.20
    13 PS417_20570 3-oxoacyl-ACP synthase 0.78 0.20
    14 PS417_13560 nickel permease no 0.20
    15 PS417_26240 N-methylproline demethylase 0.34 0.19
    16 PS417_23520 cysteine biosynthesis protein CysZ no 0.19
    17 PS417_01195 RNA-binding protein S4 no 0.19
    18 PS417_04795 alginate O-acetyltransferase no 0.19
    19 PS417_23375 cytochrome C oxidase 0.27 0.18
    20 PS417_23370 protoheme IX farnesyltransferase no 0.18

    Or look for negative cofitness