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  • Top cofit genes for GFF3764 from Variovorax sp. SCN45

    INTEGRAL MEMBRANE PROTEIN (Rhomboid family)
    SEED: INTEGRAL MEMBRANE PROTEIN (Rhomboid family)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5184 no description no 0.49
    2 GFF4561 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) no 0.48
    3 GFF3143 hypothetical protein no 0.48
    4 GFF3796 putative lipoprotein no 0.47
    5 GFF4597 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.25 0.46
    6 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) no 0.46
    7 GFF877 putative membrane protein no 0.46
    8 GFF6609 FIG00957806: hypothetical protein no 0.45
    9 GFF7048 hypothetical protein no 0.45
    10 GFF3164 Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2) no 0.43
    11 GFF2004 no description no 0.43
    12 GFF2040 Putative drug efflux protein no 0.43
    13 GFF4142 no description no 0.43
    14 GFF4812 no description no 0.43
    15 GFF2771 BUG/TctC family periplasmic protein no 0.43
    16 GFF2156 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) no 0.42
    17 GFF3967 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) no 0.42
    18 GFF4326 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) no 0.42
    19 GFF6903 Transcriptional regulator, LysR family 0.31 0.42
    20 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) no 0.42

    Or look for negative cofitness