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  • Top cofit genes for PS417_01915 from Pseudomonas simiae WCS417

    ATP-dependent protease ATP-binding subunit HslU
    SEED: ATP-dependent hsl protease ATP-binding subunit HslU
    KEGG: ATP-dependent HslUV protease ATP-binding subunit HslU

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27800 exodeoxyribonuclease III 0.62 0.40
    2 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase 0.40 0.36
    3 PS417_20105 glycosyl transferase no 0.36
    4 PS417_27865 LysR family transcriptional regulator 0.61 0.35
    5 PS417_27245 aminotransferase DegT 0.61 0.34
    6 PS417_20095 hypothetical protein no 0.34
    7 PS417_05635 membrane protein no 0.34
    8 PS417_21595 flagellar biosynthesis protein FlgN no 0.33
    9 PS417_19650 chemotaxis protein CheW 0.80 0.33
    10 PS417_19840 flagellar cap protein FliD 0.78 0.33
    11 PS417_22445 ATP-dependent DNA helicase RuvB no 0.33
    12 PS417_19785 flagellar biogenesis protein 0.76 0.32
    13 PS417_14040 alkyl hydroperoxide reductase no 0.32
    14 PS417_19665 flagellar motor protein MotD 0.31 0.32
    15 PS417_19885 flagellar basal body rod protein FlgG 0.85 0.32
    16 PS417_19690 histidine kinase 0.77 0.32
    17 PS417_21575 chemotaxis protein 0.59 0.32
    18 PS417_19880 flagellar basal body L-ring protein 0.82 0.32
    19 PS417_04375 ABC transporter ATP-binding protein 0.38 0.31
    20 PS417_21565 flagellar basal body rod protein FlgC 0.52 0.31

    Or look for negative cofitness