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  • Top cofit genes for GFF3753 from Variovorax sp. SCN45

    Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    SEED: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.70
    2 GFF2649 putative autotransporter protein no 0.70
    3 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.68
    4 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.65
    5 GFF7375 Arginine:pyruvate transaminase no 0.64
    6 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.64
    7 GFF4396 Mobile element protein no 0.62
    8 GFF7322 hypothetical protein no 0.62
    9 GFF2683 Protein containing domains DUF404, DUF407 no 0.62
    10 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.61
    11 GFF3650 FIG00932140: hypothetical protein no 0.61
    12 GFF4444 Predicted nucleotidyltransferase no 0.60
    13 GFF4242 TRAP-type C4-dicarboxylate transport system, periplasmic component no 0.60
    14 GFF1376 hypothetical protein no 0.60
    15 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) no 0.60
    16 GFF5402 Transcriptional regulator, IclR family no 0.59
    17 GFF7374 FIG00984748: hypothetical protein no 0.59
    18 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.59
    19 GFF6294 Cell division protein no 0.58
    20 GFF6219 hypothetical protein no 0.58

    Or look for negative cofitness