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Cofit
Protein
Homologs
Top cofit genes for PS417_19175 from
Pseudomonas simiae WCS417
toxin
SEED: Putative toxin subunit
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_19170
insecticidal toxin complex protein TcaB1
no
0.27
2
PS417
_20195
sodium:solute symporter
no
0.25
3
PS417
_20165
hypothetical protein
no
0.25
4
PS417
_19220
hypothetical protein
no
0.24
5
PS417
_19165
insecticidal toxin complex protein
0.27
0.23
6
PS417
_20205
LysR family transcriptional regulator
no
0.23
7
PS417
_17660
branched-chain amino acid ABC transporter substrate-binding protein
no
0.23
8
PS417
_19185
toxin
no
0.22
9
PS417
_19540
hypothetical protein
0.75
0.22
10
PS417
_20360
serine/threonine protein phosphatase
no
0.22
11
PS417
_20300
hypothetical protein
no
0.22
12
PS417
_25970
diguanylate cyclase
0.21
0.22
13
PS417
_05705
pyocin R2, holin
no
0.21
14
PS417
_19180
sugar-binding protein
no
0.21
15
PS417
_15260
protein phosphatase
no
0.21
16
PS417
_21550
hypothetical protein
no
0.21
17
PS417
_04935
hypothetical protein
no
0.21
18
PS417
_20465
hypothetical protein
no
0.20
19
PS417
_20390
hypothetical protein
no
0.20
20
PS417
_20940
invasion protein IagB
no
0.20
Or look for
negative cofitness