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    • Top cofit genes for GFF3740 from Variovorax sp. SCN45

    Transcriptional regulator, MerR family
    SEED: transcription regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5583 Transcriptional regulator PA0181, LysR family no 0.51
    2 GFF5245 FIG00771430: hypothetical protein no 0.50
    3 GFF6098 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.49
    4 GFF4582 TRAP-type C4-dicarboxylate transport system, small permease component no 0.48
    5 GFF6143 2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) no 0.48
    6 GFF5179 Acetyltransferase, GNAT family no 0.46
    7 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) no 0.46
    8 GFF4693 hypothetical protein no 0.46
    9 GFF6120 Exonuclease SbcC no 0.45
    10 GFF4859 MBL-fold metallo-hydrolase superfamily no 0.44
    11 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.44
    12 GFF3386 hypothetical protein no 0.44
    13 GFF4411 Conjugative transfer protein TrbK no 0.44
    14 GFF2259 Alcohol dehydrogenase (EC 1.1.1.1) no 0.44
    15 GFF5542 no description no 0.43
    16 GFF1449 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) no 0.43
    17 GFF2639 Ferrichrome-iron receptor no 0.43
    18 GFF5738 Flagellar biosynthesis protein FliR 0.74 0.43
    19 GFF3875 beta-N-acetylglucosaminidase (EC 3.2.1.52) no 0.42
    20 GFF64 hypothetical protein no 0.42

    Or look for negative cofitness