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  • Top cofit genes for PS417_19125 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: LysR family regulatory protein CidR

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19130 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) 0.59 0.28
    2 PS417_27610 hypothetical protein 0.49 0.24
    3 PS417_20450 hypothetical protein no 0.23
    4 PS417_09635 mannose-1-phosphate guanylyltransferase no 0.22
    5 PS417_27605 hypothetical protein no 0.22
    6 PS417_20400 hypothetical protein no 0.21
    7 PS417_20435 membrane protein no 0.21
    8 PS417_26915 GTPase SAR1 no 0.20
    9 PS417_09630 glycosyl transferase no 0.20
    10 PS417_20390 hypothetical protein no 0.20
    11 PS417_04675 deoxyribonuclease no 0.20
    12 PS417_22605 membrane protein no 0.19
    13 PS417_10645 magnesium ABC transporter ATPase 0.37 0.19
    14 PS417_07960 LysR family transcriptional regulator 0.25 0.19
    15 PS417_00240 anhydrase 0.40 0.19
    16 PS417_04215 malate transporter 0.77 0.19
    17 PS417_14535 alpha/beta hydrolase no 0.19
    18 PS417_12595 transcriptional regulator no 0.18
    19 PS417_17765 iron ABC transporter permease no 0.18
    20 PS417_19920 AraC family transcriptional regulator no 0.18

    Or look for negative cofitness