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  • Top cofit genes for PS417_01900 from Pseudomonas simiae WCS417

    poly(3-hydroxyalkanoate) depolymerase
    SEED: Poly(3-hydroxyalkanoate) depolymerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03930 thymidine phosphorylase no 0.27
    2 PS417_04015 choline ABC transporter permease no 0.25
    3 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.25
    4 PS417_19635 lipid kinase no 0.25
    5 PS417_00625 taurine dioxygenase 0.26 0.25
    6 PS417_11550 FAD-binding oxidoreductase no 0.24
    7 PS417_20585 chemotaxis protein no 0.24
    8 PS417_25135 hypothetical protein no 0.23
    9 PS417_15400 hypothetical protein no 0.23
    10 PS417_20570 3-oxoacyl-ACP synthase no 0.22
    11 PS417_08325 acyl-CoA thioesterase 0.57 0.21
    12 PS417_00635 sulfonate ABC transporter ATP-binding protein no 0.21
    13 PS417_13350 phytanoyl-CoA dioxygenase no 0.21
    14 PS417_24275 diguanylate phosphodiesterase 0.28 0.20
    15 PS417_22060 hypothetical protein no 0.20
    16 PS417_00080 potassium transporter peripheral membrane component no 0.20
    17 PS417_05000 TonB-dependent receptor 0.24 0.20
    18 PS417_15280 type VI secretion protein no 0.20
    19 PS417_26045 hypothetical protein no 0.20
    20 PS417_25895 glyoxalase no 0.20

    Or look for negative cofitness