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  • Top cofit genes for GFF372 from Variovorax sp. SCN45

    PMID: 11481431
    SEED: PMID: 11481431

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6878 hypothetical protein no 0.96
    2 GFF6875 hypothetical protein no 0.95
    3 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 0.77 0.94
    4 GFF5076 hypothetical protein no 0.94
    5 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.67 0.93
    6 GFF4626 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL no 0.72
    7 GFF2356 RNase adapter protein RapZ 0.33 0.69
    8 GFF4625 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33) no 0.69
    9 GFF1218 O-antigen acetylase no 0.67
    10 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.66
    11 GFF305 uncharacterized domain / RidA/YER057c/UK114 superfamily, group 5 no 0.65
    12 GFF2575 Quinolinate synthetase (EC 2.5.1.72) no 0.63
    13 GFF4530 MBL-fold metallo-hydrolase superfamily no 0.61
    14 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.61
    15 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.60
    16 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.59
    17 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.59
    18 GFF6638 no description no 0.59
    19 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.58
    20 GFF767 Alpha-amylase (EC 3.2.1.1) no 0.57

    Or look for negative cofitness