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  • Top cofit genes for GFF3719 from Variovorax sp. SCN45

    Pyrimidine monooxygenase RutA (EC 1.14.99.46)
    SEED: Predicted monooxygenase RutA in novel pyrimidine catabolism pathway
    KEGG: putative monooxygenase RutA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF204 hypothetical protein no 0.56
    2 GFF2989 hypothetical protein no 0.48
    3 GFF7177 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B no 0.48
    4 GFF112 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.47
    5 GFF5772 Flagellar biosynthesis protein FlhF no 0.46
    6 GFF466 hypothetical protein no 0.45
    7 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily no 0.44
    8 GFF7083 Mobile element protein no 0.43
    9 GFF4701 Various polyols ABC transporter, permease protein 2 no 0.43
    10 GFF2839 Protein GlcG no 0.43
    11 GFF2776 hypothetical protein no 0.43
    12 GFF6568 hypothetical protein no 0.43
    13 GFF586 Pirin 0.36 0.43
    14 GFF2611 Fructose ABC transporter, substrate-binding component FrcB no 0.43
    15 GFF566 Type IV fimbrial biogenesis protein PilV no 0.42
    16 GFF6245 no description no 0.42
    17 GFF2263 putative membrane protein no 0.41
    18 GFF2986 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) no 0.41
    19 GFF2857 Permease of the drug/metabolite transporter (DMT) superfamily no 0.41
    20 GFF1937 Hemolysins and related proteins containing CBS domains no 0.40

    Or look for negative cofitness