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  • Top cofit genes for GFF3718 from Variovorax sp. SCN45

    Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB (EC 3.5.1.110)
    SEED: Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway
    KEGG: putative isochorismatase family protein RutB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3662 hypothetical protein no 0.59
    2 GFF1656 hypothetical protein no 0.57
    3 GFF4264 surface antigen gene no 0.56
    4 GFF660 FIG00974024: hypothetical protein no 0.55
    5 GFF3502 hypothetical protein no 0.54
    6 GFF4857 benzoate MFS transporter BenK no 0.53
    7 GFF5117 Transcriptional regulator, LysR family no 0.53
    8 GFF6003 no description no 0.52
    9 GFF335 Cytosine deaminase (EC 3.5.4.1) 0.17 0.52
    10 GFF183 Virulence protein no 0.52
    11 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.53 0.51
    12 GFF2303 Uncharacterized DUF2909 protein BB4826 no 0.51
    13 GFF5021 Tripartite tricarboxylate transporter TctA family no 0.51
    14 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.51
    15 GFF1232 Uncharacterized protein conserved in bacteria no 0.50
    16 GFF2019 FIG00976956: hypothetical protein no 0.50
    17 GFF3386 hypothetical protein no 0.50
    18 GFF5026 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.50
    19 GFF5118 gluconolactonase family protein no 0.50
    20 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.50

    Or look for negative cofitness