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  • Top cofit genes for PS417_19010 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11905 chemotaxis protein no 0.21
    2 PS417_09035 hypothetical protein no 0.20
    3 PS417_12480 peptidase C39 no 0.20
    4 PS417_08010 adenylate cyclase no 0.19
    5 PS417_25970 diguanylate cyclase 0.51 0.19
    6 PS417_28205 transporter no 0.19
    7 PS417_01080 acyl-CoA dehydrogenase no 0.19
    8 PS417_19185 toxin no 0.19
    9 PS417_19540 hypothetical protein no 0.19
    10 PS417_26375 membrane protein no 0.18
    11 PS417_11900 conjugal transfer protein TraR no 0.18
    12 PS417_17210 MFS transporter no 0.17
    13 PS417_18085 general secretion pathway protein GspE 0.54 0.17
    14 PS417_15950 major facilitator transporter no 0.17
    15 PS417_24955 hypothetical protein no 0.17
    16 PS417_04485 hypothetical protein no 0.17
    17 PS417_10380 catalase 0.31 0.17
    18 PS417_13710 hypothetical protein no 0.17
    19 PS417_17170 carbon-nitrogen hydrolase 0.40 0.17
    20 PS417_22390 lactate dehydrogenase no 0.17

    Or look for negative cofitness