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  • Top cofit genes for PS417_01890 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator
    SEED: Transcriptional regulator PhaD

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24155 ATP-binding protein no 0.36
    2 PS417_01885 poly(3-hydroxyalkanoate) granule-associated protein PhaF no 0.27
    3 PS417_20125 phosphoribosylglycinamide formyltransferase no 0.26
    4 PS417_10220 hypothetical protein no 0.26
    5 PS417_10205 hypothetical protein no 0.25
    6 PS417_19965 histidine kinase 0.46 0.25
    7 PS417_16570 isocitrate lyase 0.39 0.25
    8 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF no 0.24
    9 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.33 0.24
    10 PS417_17435 dehydrogenase 0.30 0.24
    11 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein no 0.24
    12 PS417_21750 acetyl-CoA synthetase no 0.23
    13 PS417_00135 glycine/betaine ABC transporter substrate-binding protein no 0.23
    14 PS417_22030 glutathione S-transferase no 0.23
    15 PS417_27610 hypothetical protein no 0.22
    16 PS417_00180 tryptophan synthase subunit alpha 0.32 0.21
    17 PS417_22385 quinolinate synthase A 0.54 0.21
    18 PS417_25070 hypothetical protein no 0.21
    19 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC no 0.20
    20 PS417_26040 malate synthase 0.16 0.20

    Or look for negative cofitness