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  • Top cofit genes for GFF371 from Variovorax sp. SCN45

    RNA-binding protein YhbY
    SEED: FIG004454: RNA binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3621 Magnesium and cobalt transport protein CorA no 0.73
    2 GFF3619 no description no 0.69
    3 GFF3624 Putative transmembrane protein 0.57 0.63
    4 GFF3618 Transcriptional regulator, LysR family no 0.63
    5 GFF3625 Ferredoxin, 2Fe-2S no 0.61
    6 GFF3414 Fumarylacetoacetase (EC 3.7.1.2) no 0.60
    7 GFF651 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) no 0.59
    8 GFF2563 Two-component system sensor histidine kinase no 0.59
    9 GFF5209 DUF1854 domain-containing protein no 0.59
    10 GFF4511 Transcriptional regulator, LysR family no 0.58
    11 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.58
    12 GFF4790 Nudix-related transcriptional regulator NrtR no 0.56
    13 GFF649 no description no 0.55
    14 GFF307 FIG143263: Glycosyl transferase no 0.55
    15 GFF1393 hypothetical protein no 0.54
    16 GFF3617 Dienelactone hydrolase family protein no 0.53
    17 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 0.61 0.53
    18 GFF167 Two-component system sensor histidine kinase no 0.51
    19 GFF6456 Lipid A phosphoethanolamine transferase, putative no 0.51
    20 GFF5130 hypothetical protein no 0.51

    Or look for negative cofitness