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  • Top cofit genes for GFF3709 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown)
    SEED: Nucleoside ABC transporter, periplasmic nucleoside-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1605 no description no 0.63
    2 GFF3820 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.61
    3 GFF6537 hypothetical protein no 0.56
    4 GFF6683 Efflux ABC transporter, permease protein no 0.55
    5 GFF6233 hypothetical protein no 0.55
    6 GFF6452 Putative diheme cytochrome c-553 no 0.54
    7 GFF1922 Acyl-CoA dehydrogenase no 0.54
    8 GFF2919 no description no 0.53
    9 GFF3313 Response regulator CreB of two-component signal transduction system CreBC no 0.52
    10 GFF5941 hypothetical protein no 0.52
    11 GFF2231 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) no 0.51
    12 GFF6517 Cation transport protein ChaC no 0.51
    13 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) no 0.50
    14 GFF3717 Putative aminoacrylate peracid reductase RutC @ RidA/YER057c/UK114 superfamily protein no 0.49
    15 GFF5576 Acyl-CoA dehydrogenase no 0.49
    16 GFF1504 Alkylhydroperoxidase AhpD domain protein no 0.48
    17 GFF5659 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing no 0.48
    18 GFF4520 hypothetical protein no 0.48
    19 GFF1595 Transcriptional regulator, AraC family no 0.47
    20 GFF6481 Bll1370 protein no 0.47

    Or look for negative cofitness