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  • Top cofit genes for PS417_18945 from Pseudomonas simiae WCS417

    endoribonuclease
    SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19560 amino acid ABC transporter substrate-binding protein no 0.45
    2 PS417_10720 chemotaxis protein CheY no 0.41
    3 PS417_16370 chemotaxis protein CheY 0.24 0.41
    4 PS417_28265 pyridoxamine kinase no 0.38
    5 PS417_16160 ABC transporter substrate-binding protein no 0.35
    6 PS417_09665 dimethylglycine dehydrogenase no 0.35
    7 PS417_24885 transcriptional regulator no 0.33
    8 PS417_05985 chemotaxis protein CheY no 0.33
    9 PS417_06365 RNA polymerase sigma factor no 0.32
    10 PS417_19145 membrane protein no 0.32
    11 PS417_05975 chemotaxis protein CheW no 0.32
    12 PS417_11445 enoyl-CoA hydratase no 0.32
    13 PS417_03725 acyltransferase no 0.31
    14 PS417_13940 racemase 0.27 0.31
    15 PS417_12610 RNA polymerase sigma factor no 0.31
    16 PS417_22190 diguanylate cyclase no 0.31
    17 PS417_05070 serine/threonine protein kinase 0.61 0.30
    18 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.30
    19 PS417_21040 sulfurylase no 0.30
    20 PS417_11450 AraC family transcriptional regulator no 0.29

    Or look for negative cofitness