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Cofit
Protein
Homologs
Top cofit genes for PS417_00190 from
Pseudomonas simiae WCS417
LysR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_01705
Formiminoglutamic iminohydrolase (EC 3.5.3.13)
(from data)
0.70
0.24
2
PS417
_20160
cysteine synthase
0.34
0.23
3
PS417
_01720
Urocanate hydratase (EC 4.2.1.49)
(from data)
0.66
0.22
4
PS417
_14130
DNA topoisomerase
no
0.22
5
PS417
_18690
aromatic amino acid aminotransferase
0.51
0.20
6
PS417
_09700
transaldolase
no
0.19
7
PS417
_18590
SAM-dependent methyltransferase
0.39
0.19
8
PS417
_03705
2-alkenal reductase
no
0.19
9
PS417
_22230
class I peptide chain release factor
no
0.19
10
PS417
_16570
isocitrate lyase
0.33
0.19
11
PS417
_26080
TonB-dependent receptor
0.74
0.19
12
PS417
_27795
orotate phosphoribosyltransferase
0.33
0.18
13
PS417
_13375
LysR family transcriptional regulator
no
0.18
14
PS417
_00180
tryptophan synthase subunit alpha
0.80
0.18
15
PS417
_01605
phosphoglycerate mutase
no
0.18
16
PS417
_24765
membrane protein
no
0.18
17
PS417
_28110
transglycosylase
no
0.18
18
PS417
_05595
ornithine carbamoyltransferase
0.39
0.18
19
PS417
_08430
phospho-2-dehydro-3-deoxyheptonate aldolase
no
0.17
20
PS417
_10740
hypothetical protein
no
0.17
Or look for
negative cofitness