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  • Top cofit genes for GFF3698 from Variovorax sp. SCN45

    ATP-dependent, 3'-5' DNA helicase with strand annealing activity
    SEED: FIG003033: Helicase domain protein
    KEGG: ATP-dependent helicase Lhr and Lhr-like helicase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6562 T1SS secreted agglutinin RTX no 0.60
    2 GFF6600 Sulfur carrier protein FdhD no 0.59
    3 GFF3135 no description no 0.58
    4 GFF7323 Transcriptional response regulatory protein GlrR no 0.53
    5 GFF3915 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain no 0.52
    6 GFF4396 Mobile element protein no 0.52
    7 GFF5941 hypothetical protein no 0.52
    8 GFF326 Polysaccharide deacetylase, caspase activity no 0.51
    9 GFF304 Ubiquinone/menaquinone biosynthesis methyltransferase family protein no 0.51
    10 GFF4023 no description no 0.51
    11 GFF6254 Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1) no 0.50
    12 GFF6957 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) 0.10 0.49
    13 GFF2828 Uncharacterized protein CC_3059 no 0.48
    14 GFF315 FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase no 0.48
    15 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) no 0.47
    16 GFF1551 hypothetical protein 0.16 0.47
    17 GFF5020 Tripartite tricarboxylate transporter TctB family no 0.47
    18 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.47
    19 GFF1319 no description no 0.47
    20 GFF5860 no description no 0.47

    Or look for negative cofitness