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Cofit
Protein
Homologs
Top cofit genes for GFF3697 from
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Phage excisionase
SEED: Excisionase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4036
tRNA-Ser-CGA
no
0.69
2
GFF2746
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
no
0.68
3
GFF2979
VapC toxin protein
no
0.63
4
GFF1919
Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
no
0.63
5
GFF3696
Integrase
no
0.62
6
GFF1442
Redox-sensitive transcriptional activator SoxR
no
0.61
7
GFF1237
FIG01046247: hypothetical protein
no
0.61
8
GFF1795
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)
no
0.60
9
GFF1340
FIG036507: Fimbriae usher protein StdB
no
0.60
10
GFF1893
LysR family transcriptional regulator lrhA
no
0.60
11
GFF1145
PsiB protein
no
0.60
12
GFF1255
Transposase
no
0.59
13
GFF3082
hypothetical protein
no
0.59
14
GFF465
Long polar fimbria protein A precursor
no
0.58
15
GFF2913
Argininosuccinate synthase (EC 6.3.4.5)
no
0.58
16
GFF464
FIG00543870: hypothetical protein
no
0.57
17
GFF3065
A/G-specific adenine glycosylase (EC 3.2.2.-)
no
0.57
18
GFF3120
Cystathionine beta-lyase (EC 4.4.1.8)
no
0.57
19
GFF4533
Transcriptional regulatory protein CitB, DpiA
no
0.57
20
GFF2637
Putative uncharacterized protein ydbH
no
0.57
Or look for
negative cofitness