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  • Top cofit genes for PS417_18915 from Pseudomonas simiae WCS417

    hypothetical protein
    SEED: major pilin protein fimA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11195 NAD(P)H-quinone oxidoreductase 0.15 0.20
    2 PS417_23715 cupin no 0.20
    3 PS417_15170 long-chain fatty acid--CoA ligase no 0.20
    4 PS417_14655 lysine transporter LysE no 0.19
    5 PS417_06110 RND transporter no 0.18
    6 PS417_20295 RNA-directed DNA polymerase no 0.18
    7 PS417_21535 chemotaxis protein CheY no 0.17
    8 PS417_15730 major facilitator transporter no 0.17
    9 PS417_09585 acetyltransferase no 0.17
    10 PS417_04795 alginate O-acetyltransferase 0.32 0.17
    11 PS417_04925 MFS transporter 0.17 0.16
    12 PS417_15625 lactate dehydrogenase no 0.16
    13 PS417_26940 phosphonate ABC transporter permease no 0.16
    14 PS417_21370 allantoin permease no 0.15
    15 PS417_19270 hypothetical protein no 0.15
    16 PS417_08340 type IV secretion protein Rhs no 0.15
    17 PS417_08000 beta-hydroxylase no 0.15
    18 PS417_28285 hypothetical protein no 0.15
    19 PS417_20245 copper resistance protein CopD no 0.15
    20 PS417_14635 GDSL family lipase no 0.15

    Or look for negative cofitness