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    • Top cofit genes for GFF3696 from Variovorax sp. SCN45

    mRNA 3-end processing factor
    SEED: mRNA 3-end processing factor
    KEGG: putative mRNA 3-end processing factor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3516 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) 0.66 0.59
    2 GFF3204 no description no 0.58
    3 GFF1474 Transcriptional regulator, LysR family no 0.55
    4 GFF181 Protein of unknown function (DUF1501) no 0.54
    5 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.50
    6 GFF6083 hypothetical protein PA3071 0.54 0.50
    7 GFF4332 Aldehyde dehydrogenase (EC 1.2.1.3) 0.27 0.50
    8 GFF6682 Efflux ABC transporter, permease protein no 0.49
    9 GFF5899 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.52 0.49
    10 GFF5606 Xylose-responsive transcription regulator, ROK family no 0.49
    11 GFF4107 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.48
    12 GFF1211 D-aminopeptidase (EC 3.4.11.19) no 0.47
    13 GFF1707 no description no 0.47
    14 GFF6869 no description no 0.47
    15 GFF152 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.46
    16 GFF6870 FIG00904791: hypothetical protein no 0.46
    17 GFF459 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily / DUF3471 domain no 0.45
    18 GFF2608 Transcriptional regulator FrcR for fructose utilization, ROK family no 0.45
    19 GFF1763 HemK family modification methylase PA2179 no 0.45
    20 GFF5699 Smr domain protein no 0.45

    Or look for negative cofitness