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  • Top cofit genes for GFF3693 from Variovorax sp. SCN45

    Oxidoreductase
    SEED: Nucleoside-diphosphate-sugar epimerases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.58
    2 GFF312 FIG021862: membrane protein, exporter no 0.57
    3 GFF6049 Acyl-CoA dehydrogenase family protein no 0.57
    4 GFF375 hypothetical protein no 0.55
    5 GFF969 ATP-dependent protease HslVU (ClpYQ), peptidase subunit no 0.53
    6 GFF6758 Lactoylglutathione lyase (EC 4.4.1.5) 0.18 0.53
    7 GFF7308 Uncharacterized MFS-type transporter no 0.52
    8 GFF1210 D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-) no 0.52
    9 GFF4993 putative tetratricopeptide repeat family protein no 0.51
    10 GFF2566 AsmA no 0.51
    11 GFF4644 no description no 0.50
    12 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) no 0.50
    13 GFF7027 no description no 0.49
    14 GFF3553 FOG: TPR repeat no 0.49
    15 GFF3300 hypothetical protein no 0.49
    16 GFF3572 Efflux ABC transporter, permease protein 0.58 0.48
    17 GFF2223 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.48
    18 GFF6642 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.48
    19 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B no 0.48
    20 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.48

    Or look for negative cofitness