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  • Top cofit genes for GFF3692 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Threonine dehydratase (EC 4.3.1.19)
    SEED: Threonine dehydratase (EC 4.3.1.19)
    KEGG: diaminopropionate ammonia-lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2216 DNA polymerase I (EC 2.7.7.7) no 0.56
    2 GFF3490 Exodeoxyribonuclease III (EC 3.1.11.2) no 0.53
    3 GFF2509 Sugar efflux transporter SotB no 0.51
    4 GFF2061 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.38 0.51
    5 GFF4341 Probable secreted protein no 0.47
    6 GFF1074 putative inner membrane protein no 0.47
    7 GFF2512 Glutaminase (EC 3.5.1.2) 0.39 0.47
    8 GFF2487 putative secreted protein no 0.46
    9 GFF3705 TsgA protein homolog no 0.45
    10 GFF3426 Virulence protein MsgA no 0.44
    11 GFF4852 Serine transporter no 0.44
    12 GFF1802 Outer membrane protein N precursor no 0.44
    13 GFF2473 DNA recombination and repair protein RecO no 0.44
    14 GFF2553 Osmotically inducible protein C no 0.44
    15 GFF2792 Hydrogenase maturation factor HoxQ no 0.43
    16 GFF3884 Colanic acid biosynthesis glycosyl transferase WcaL no 0.43
    17 GFF1940 Putative DNA-binding protein in cluster with Type I restriction-modification system no 0.43
    18 GFF4284 hypothetical protein no 0.43
    19 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon no 0.43
    20 GFF1756 DNA recombination and repair protein RecF 0.32 0.42

    Or look for negative cofitness