• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_18880 from Pseudomonas simiae WCS417

    SAM-dependent methyltransferase
    SEED: Putative tRNA-m1A22 methylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05930 spermidine/putrescine ABC transporter permease no 0.20
    2 PS417_26460 NAD-dependent DNA ligase LigB no 0.20
    3 PS417_11590 ATPase no 0.20
    4 PS417_15375 peptidoglycan-binding protein 0.16 0.19
    5 PS417_00220 hypothetical protein no 0.19
    6 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein no 0.18
    7 PS417_11705 cyclic peptide transporter 0.15 0.18
    8 PS417_24335 50S rRNA methyltransferase 0.39 0.18
    9 PS417_11995 RNA polymerase sigma factor no 0.18
    10 PS417_13330 autotransporter no 0.18
    11 PS417_15760 molybdenum cofactor biosynthesis protein MoaA no 0.17
    12 PS417_19495 N-acyl-L-amino acid amidohydrolase no 0.17
    13 PS417_24500 DEAD/DEAH box helicase no 0.17
    14 PS417_12815 diguanylate cyclase 0.16 0.17
    15 PS417_08830 membrane protein no 0.16
    16 PS417_08965 5-oxo-L-prolinase no 0.16
    17 PS417_15895 iron dicitrate transport regulator FecR 0.31 0.16
    18 PS417_24130 integrase no 0.16
    19 PS417_08440 hypothetical protein 0.50 0.16
    20 PS417_19955 hypothetical protein no 0.16

    Or look for negative cofitness