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  • Top cofit genes for GFF3678 from Variovorax sp. SCN45

    D-alanine aminotransferase (EC 2.6.1.21)
    SEED: D-alanine aminotransferase (EC 2.6.1.21)
    KEGG: D-alanine transaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3212 Oxidoreductase 0.64 0.57
    2 GFF3101 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein no 0.51
    3 GFF4895 FIG074102: hypothetical protein no 0.50
    4 GFF3376 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.50
    5 GFF5144 no description no 0.49
    6 GFF3676 Outer membrane protein romA no 0.49
    7 GFF4280 oxidoreductase FAD/NAD(P)-binding domain protein no 0.49
    8 GFF3689 FIG01198523: hypothetical protein no 0.49
    9 GFF2023 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.43 0.48
    10 GFF7390 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.47
    11 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.47
    12 GFF3199 Ser/Thr protein phosphatase family protein no 0.47
    13 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system no 0.46
    14 GFF4361 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.46
    15 GFF2010 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.40 0.46
    16 GFF4966 no description no 0.46
    17 GFF1134 FIG00931167: hypothetical protein no 0.45
    18 GFF3595 no description no 0.45
    19 GFF4830 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.44
    20 GFF3874 Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7) no 0.44

    Or look for negative cofitness