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Cofit
Protein
Homologs
Top cofit genes for GFF3676 from
Variovorax sp. SCN45
Outer membrane protein romA
SEED: Outer membrane protein romA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1471
Uncharacterized MFS-type transporter
no
0.58
2
GFF4292
no description
no
0.57
3
GFF3101
RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein
no
0.55
4
GFF3596
TRAP-type C4-dicarboxylate transport system, large permease component
no
0.55
5
GFF3541
hypothetical protein
no
0.54
6
GFF4741
Small heat shock protein
no
0.54
7
GFF6220
hypothetical protein
no
0.54
8
GFF7272
D-glucarate permease
no
0.54
9
GFF4887
FIG00582580: hypothetical protein
no
0.53
10
GFF3565
Acyl-CoA dehydrogenase
no
0.53
11
GFF6323
Benzoate transport protein
no
0.53
12
GFF3008
hypothetical protein
no
0.52
13
GFF4961
ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.52
14
GFF5030
no description
no
0.52
15
GFF1436
CaiB/BaiF family protein
no
0.52
16
GFF1063
dioxygenase, TauD/TfdA family
no
0.51
17
GFF6317
hypothetical protein
no
0.51
18
GFF6432
no description
no
0.51
19
GFF6457
no description
no
0.50
20
GFF3212
Oxidoreductase
no
0.50
Or look for
negative cofitness