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  • Top cofit genes for PS417_18795 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12545 xanthine permease XanP no 0.24
    2 PS417_05650 leucyl-tRNA synthetase no 0.23
    3 PS417_02880 copper chaperone no 0.21
    4 PS417_15055 C4-dicarboxylate ABC transporter 0.25 0.21
    5 PS417_12610 RNA polymerase sigma factor no 0.19
    6 PS417_12835 GNAT family acetyltransferase no 0.19
    7 PS417_26950 LysR family transcriptional regulator no 0.18
    8 PS417_03380 hypothetical protein no 0.18
    9 PS417_21025 PEP synthetase regulatory protein no 0.18
    10 PS417_25370 hypothetical protein no 0.18
    11 PS417_24595 histidine kinase no 0.18
    12 PS417_14660 methyltransferase no 0.18
    13 PS417_21055 threonyl-tRNA synthetase 0.30 0.18
    14 PS417_24605 thiamine-phosphate pyrophosphorylase no 0.18
    15 PS417_24600 hydrogenase 0.32 0.17
    16 PS417_15445 ABC transporter permease no 0.17
    17 PS417_03670 MerR family transcriptional regulator no 0.17
    18 PS417_14405 ABC transporter permease no 0.17
    19 PS417_23415 AraC family transcriptional regulator 0.79 0.17
    20 PS417_01820 chemotaxis protein no 0.17

    Or look for negative cofitness