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  • Top cofit genes for GFF3664 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1882 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit (EC 1.2.7.-) no 0.56
    2 GFF5720 Flagellar basal-body rod protein FlgG no 0.52
    3 GFF1928 Fumarylacetoacetate hydrolase family protein no 0.51
    4 GFF6052 HNH endonuclease family protein no 0.50
    5 GFF7274 hypothetical protein no 0.49
    6 GFF1357 no description no 0.49
    7 GFF2172 Permease of the drug/metabolite transporter (DMT) superfamily no 0.48
    8 GFF2329 Phosphoglycerate mutase (EC 5.4.2.11) no 0.48
    9 GFF1333 para-nitrobenzyl esterase (intracellular esterase B) no 0.48
    10 GFF5112 Glutathione peroxidase (EC 1.11.1.9) @ Thioredoxin peroxidase (EC 1.11.1.15) no 0.48
    11 GFF6252 Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1) no 0.47
    12 GFF6405 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.47
    13 GFF1516 TRAP-type C4-dicarboxylate transport system, large permease component no 0.47
    14 GFF6049 Acyl-CoA dehydrogenase family protein no 0.46
    15 GFF4162 Aldehyde dehydrogenase B (EC 1.2.1.22) no 0.46
    16 GFF4175 FMN reductase (NADH) (EC 1.5.1.42) no 0.45
    17 GFF467 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.45
    18 GFF4740 no description no 0.44
    19 GFF2895 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) no 0.44
    20 GFF6564 hypothetical protein no 0.44

    Or look for negative cofitness