Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Top cofit genes for GFF3661 from
Variovorax sp. SCN45
Putative oxidoreductase YncB
SEED: Putative oxidoreductase YncB
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1148
hypothetical protein
no
0.58
2
GFF7116
2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39)
no
0.51
3
GFF7327
FIG074102: hypothetical protein
no
0.50
4
GFF1837
Transcriptional regulator, LysR family
no
0.50
5
GFF3025
Proton/sodium-glutamate symport protein
no
0.48
6
GFF2078
hypothetical protein
no
0.47
7
GFF4568
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
no
0.47
8
GFF975
4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9)
no
0.47
9
GFF7193
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.46
10
GFF1465
ABC transporter spermidine/putrescine-binding protein
no
0.45
11
GFF274
Probable RNA methyltransferase PA1839
no
0.45
12
GFF4389
Type IV secretory pathway, VirD2 components (relaxase)
no
0.45
13
GFF6636
Hydrolase, alpha/beta fold family
no
0.45
14
GFF5528
Conjugative transfer protein TrbL
no
0.44
15
GFF3984
Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.44
16
GFF1731
Short-chain dehydrogenase/reductase SDR?
no
0.44
17
GFF6713
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
no
0.43
18
GFF2873
Propionyl-CoA thioesterase activity
0.38
0.43
19
GFF2033
no description
no
0.42
20
GFF2156
Deoxyribodipyrimidine photolyase (EC 4.1.99.3)
0.58
0.42
Or look for
negative cofitness