Top cofit genes for GFF3659 from Variovorax sp. SCN45

Two-component transcriptional response regulator, OmpR family
SEED: Phosphate regulon transcriptional regulatory protein PhoB (SphR)
KEGG: two-component system, OmpR family, response regulator RpaB

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF803		MutT/Nudix family protein	no	0.59
2	GFF40		no description	no	0.58
3	GFF379		Ribonuclease HII (EC 3.1.26.4)	no	0.56
4	GFF7340		ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)	no	0.55
5	GFF5732		Methyl-accepting chemotaxis sensor/transducer protein	no	0.55
6	GFF535		Transcriptional regulator, AraC family	no	0.54
7	GFF918		Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)	no	0.54
8	GFF1648		Ligand-binding SRPBCC domain protein family	no	0.54
9	GFF420		Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)	no	0.52
10	GFF4868		Type IV secretory pathway, VirD2 components (relaxase)	no	0.52
11	GFF5239		hypothetical protein	no	0.51
12	GFF3925		hypothetical protein	no	0.51
13	GFF46		Transcriptional regulators of sugar metabolism	no	0.50
14	GFF5018		Uncharacterized protein YpeB	no	0.50
15	GFF6139		Serine/threonine kinase	no	0.50
16	GFF6788		Multicopper oxidase	no	0.49
17	GFF2794		Molybdopterin synthase catalytic subunit MoaE (EC 2.8.1.12)	no	0.49
18	GFF2157		UPF0301 protein YqgE	no	0.49
19	GFF813		Transcriptional regulator PA0877, LysR family	no	0.49
20	GFF6927		Transcriptional regulator, ArsR family	no	0.48

Or look for negative cofitness