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  • Top cofit genes for GFF3657 from Variovorax sp. SCN45

    Mlr5572 protein
    SEED: Mlr5572 protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2163 hypothetical protein no 0.53
    2 GFF3776 no description no 0.52
    3 GFF1310 hypothetical protein no 0.52
    4 GFF918 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) no 0.51
    5 GFF7214 Peptidase M20D, amidohydrolase no 0.50
    6 GFF4868 Type IV secretory pathway, VirD2 components (relaxase) no 0.50
    7 GFF5978 Nucleoside 2-deoxyribosyltransferase no 0.49
    8 GFF6542 Transcriptional regulator, AcrR family no 0.48
    9 GFF6613 no description no 0.47
    10 GFF940 Permease of the drug/metabolite transporter (DMT) superfamily 0.22 0.45
    11 GFF2262 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.45
    12 GFF5224 Uncharacterized MFS-type transporter no 0.45
    13 GFF6373 T6SS component TssA (ImpA) no 0.45
    14 GFF4139 probable epoxide hydrolase no 0.44
    15 GFF1665 Nicotinamidase/isochorismatase family protein no 0.44
    16 GFF7316 no description no 0.44
    17 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO no 0.44
    18 GFF7000 Flagellar L-ring protein FlgH no 0.43
    19 GFF4828 no description no 0.43
    20 GFF2415 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) no 0.43

    Or look for negative cofitness