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  • Top cofit genes for PS417_18705 from Pseudomonas simiae WCS417

    succinate dehydrogenase
    SEED: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
    KEGG: aldehyde dehydrogenase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19615 chemotaxis protein CheW no 0.69
    2 PS417_19630 LuxR family transcriptional regulator 0.46 0.67
    3 PS417_07095 histidine kinase no 0.66
    4 PS417_19625 histidine kinase no 0.64
    5 PS417_19635 lipid kinase 0.48 0.60
    6 PS417_19620 hypothetical protein no 0.59
    7 PS417_18540 colicin V production CvpA no 0.59
    8 PS417_20585 chemotaxis protein no 0.56
    9 PS417_19660 cobalamin biosynthesis protein CobQ no 0.56
    10 PS417_01990 cell division protein no 0.55
    11 PS417_19645 chemotaxis protein no 0.55
    12 PS417_02210 diguanylate cyclase 0.81 0.54
    13 PS417_19800 flagellar motor switch protein FliG 0.12 0.54
    14 PS417_19820 histidine kinase 0.13 0.54
    15 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.53
    16 PS417_19805 flagellar M-ring protein FliF 0.12 0.53
    17 PS417_21390 hypothetical protein no 0.52
    18 PS417_19740 flagellar biosynthesis protein flip 0.10 0.52
    19 PS417_19745 flagellar assembly protein FliO no 0.51
    20 PS417_20650 hypothetical protein no 0.51

    Or look for negative cofitness