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  • Top cofit genes for PS417_18700 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: LysR family transcriptional regulator YneJ

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00280 radical SAM protein 0.27 0.24
    2 PS417_04375 ABC transporter ATP-binding protein 0.82 0.22
    3 PS417_21900 allophanate hydrolase no 0.21
    4 PS417_00740 membrane protein 0.48 0.20
    5 PS417_20475 hypothetical protein no 0.19
    6 PS417_09050 transcriptional regulator 0.56 0.19
    7 PS417_24210 dolichyl-phosphate-mannose-protein mannosyltransferase no 0.18
    8 PS417_11790 ABC transporter substrate-binding protein no 0.18
    9 PS417_00265 GMC family oxidoreductase no 0.18
    10 PS417_11935 ABC transporter substrate-binding protein no 0.18
    11 PS417_09215 MFS transporter no 0.18
    12 PS417_04035 hypothetical protein no 0.17
    13 PS417_03895 methyltransferase 0.40 0.17
    14 PS417_09035 hypothetical protein 0.34 0.17
    15 PS417_13440 amino acid permease no 0.17
    16 PS417_23850 ABC transporter permease 0.30 0.17
    17 PS417_05420 ATPase no 0.17
    18 PS417_28135 sodium:alanine symporter no 0.17
    19 PS417_05230 membrane protein no 0.17
    20 PS417_10080 hypothetical protein no 0.17

    Or look for negative cofitness