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  • Top cofit genes for GFF3652 from Sphingobium sp. HT1-2

    Two-component transcriptional response regulator, OmpR family
    SEED: response regulator in two-component regulatory system with PhoQ
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1222 hypothetical protein no 0.80
    2 GFF1572 TonB-dependent receptor no 0.80
    3 GFF2031 hypothetical protein no 0.79
    4 GFF4742 Electron transfer flavoprotein, alpha subunit no 0.77
    5 GFF3816 RNA methyltransferase Atu0341 no 0.77
    6 GFF1118 beta-1,4-glucanase (cellulase) (EC 3.2.1.4) no 0.76
    7 GFF1261 Putative glycosyltransferase no 0.76
    8 GFF5143 Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT no 0.76
    9 GFF2063 hypothetical protein no 0.75
    10 GFF1930 Gluconolactonase (EC 3.1.1.17) no 0.75
    11 GFF3176 Na+/H+ antiporter no 0.74
    12 GFF441 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.74
    13 GFF1844 hypothetical protein no 0.74
    14 GFF3892 hypothetical protein no 0.73
    15 GFF2878 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) no 0.73
    16 GFF1650 hypothetical protein no 0.73
    17 GFF4306 hypothetical protein no 0.73
    18 GFF4791 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) no 0.72
    19 GFF420 hypothetical protein no 0.72
    20 GFF3679 hypothetical protein no 0.72

    Or look for negative cofitness