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  • Top cofit genes for PS417_18685 from Pseudomonas simiae WCS417

    excinuclease ABC subunit B
    SEED: Excinuclease ABC subunit B
    KEGG: excinuclease ABC subunit B

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25395 excinuclease ABC subunit A 0.99 0.81
    2 PS417_20800 recombination protein RecR 0.88 0.63
    3 PS417_24070 recombination and repair protein 0.88 0.62
    4 PS417_10725 excinuclease ABC subunit C 0.96 0.59
    5 PS417_13500 ATP-dependent DNA helicase 0.59 0.58
    6 PS417_00015 recombinase RecF 0.94 0.56
    7 PS417_24305 DNA repair protein RadA 0.92 0.48
    8 PS417_15120 chromosome segregation protein SMC no 0.46
    9 PS417_15115 exonuclease SbcD 0.44 0.46
    10 PS417_07635 transcription-repair coupling factor 0.85 0.45
    11 PS417_06510 ATP-dependent DNA helicase DinG 0.84 0.43
    12 PS417_05815 recombinase RecA 0.81 0.42
    13 PS417_13495 nuclease 0.62 0.39
    14 PS417_00405 DNA polymerase I 0.80 0.38
    15 PS417_05200 DNA recombination protein RecO 0.87 0.35
    16 PS417_22830 DNA polymerase IV 0.84 0.34
    17 PS417_22895 tyrosine recombinase XerD 0.81 0.33
    18 PS417_19950 ATP-dependent DNA helicase RecQ 0.73 0.33
    19 PS417_04435 uracil phosphoribosyltransferase 0.96 0.31
    20 PS417_22855 ssDNA exonuclease RecJ 0.78 0.30

    Or look for negative cofitness