Top cofit genes for GFF365 from Hydrogenophaga sp. GW460-11-11-14-LB1

RNA polymerase sigma factor
SEED: RNA polymerase sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank Hit Name Description Conserved? Cofitness  
1 GFF693 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) no 0.70
2 GFF3886 Protein GlcG no 0.69
3 GFF1267 Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2 no 0.68
4 GFF248 Glycine oxidase ThiO (EC 1.4.3.19) no 0.66
5 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) no 0.66
6 GFF687 Probable transmembrane protein no 0.66
7 GFF697 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.65
8 GFF4284 Arginine-tRNA-protein transferase (EC 2.3.2.8) no 0.64
9 GFF696 Probable transmembrane protein no 0.64
10 GFF689 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) no 0.63
11 GFF4252 FIG000557: hypothetical protein co-occurring with RecR no 0.63
12 GFF208 Nucleoside ABC transporter, periplasmic nucleoside-binding protein no 0.63
13 GFF691 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 no 0.62
14 GFF4564 Methionine aminopeptidase (EC 3.4.11.18) no 0.62
15 GFF206 Nucleoside ABC transporter, permease protein 1 no 0.61
16 GFF676 Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-) no 0.61
17 GFF3729 Serine protease precursor MucD/AlgY associated with sigma factor RpoE no 0.60
18 GFF3654 FIG138315: Putative alpha helix protein no 0.60
19 GFF2574 Methionyl-tRNA formyltransferase (EC 2.1.2.9) no 0.60
20 GFF1037 Esterase/lipase no 0.60

Or look for negative cofitness