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Cofit
Protein
Homologs
Top cofit genes for GFF3648 from
Variovorax sp. SCN45
putative c'cytochrome
SEED: putative c'cytochrome
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1359
FMN-dependent NADH-azoreductase (EC 1.7.1.6)
no
0.61
2
GFF1465
ABC transporter spermidine/putrescine-binding protein
no
0.58
3
GFF6804
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.54
4
GFF1530
Nucleoside-diphosphate-sugar epimerases
no
0.53
5
GFF6312
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
no
0.51
6
GFF4861
Butyryl-CoA dehydrogenase (EC 1.3.8.1)
no
0.51
7
GFF1926
ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.50
8
GFF4106
ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.49
9
GFF5602
FIG00348944: hypothetical protein
no
0.49
10
GFF6397
LysR family transcriptional regulator PA2758
no
0.49
11
GFF2338
Amidase family protein Atu4441
no
0.49
12
GFF2290
Chromosome partitioning protein ParA
no
0.48
13
GFF1775
no description
no
0.48
14
GFF1643
MbtH-like NRPS chaperone
no
0.47
15
GFF958
ElaB protein
no
0.46
16
GFF427
no description
no
0.45
17
GFF5743
Flagellar motor switch protein FliM
no
0.45
18
GFF4272
BUG/TctC family periplasmic protein
no
0.45
19
GFF6104
Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
no
0.45
20
GFF1680
KEGG: GntR family transcriptional regulator
no
0.45
Or look for
negative cofitness