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Cofit
Protein
Homologs
Top cofit genes for GFF3647 from
Variovorax sp. SCN45
Cytochrome b
SEED: Ni,Fe-hydrogenase I cytochrome b subunit
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4420
Conjugative transfer protein TrbL
no
0.60
2
GFF959
Phage holin
no
0.60
3
GFF5626
Patatin
no
0.59
4
GFF7084
Mobile element protein
no
0.59
5
GFF4112
Rhodanese-related sulfurtransferase, 4 domains
no
0.54
6
GFF3272
Inner membrane protein, KefB/KefC family
no
0.52
7
GFF5746
Flagellar protein FliJ
no
0.52
8
GFF6024
Pyrophosphatase, MutT/nudix family (EC 3.6.1.-)
no
0.51
9
GFF476
InterPro IPR005134 COGs COG2862
no
0.50
10
GFF6099
Ser/Thr protein phosphatase family protein
no
0.50
11
GFF918
Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
no
0.49
12
GFF1518
3-dehydroquinate dehydratase II (EC 4.2.1.10)
no
0.49
13
GFF6215
no description
no
0.49
14
GFF882
Outer membrane porin
no
0.48
15
GFF3238
no description
no
0.48
16
GFF6276
Uncharacterized MFS-type transporter
no
0.48
17
GFF5545
Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
no
0.48
18
GFF3921
Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
no
0.47
19
GFF3295
Endonuclease/exonuclease/phosphatase family protein
no
0.47
20
GFF6347
AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination
no
0.47
Or look for
negative cofitness