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Cofit
Protein
Homologs
Top cofit genes for GFF3645 from
Variovorax sp. SCN45
Peroxiredoxin
SEED: Peroxiredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2099
Acyl-CoA dehydrogenase
no
0.61
2
GFF2988
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
0.53
0.58
3
GFF619
Aspartate carbamoyltransferase (EC 2.1.3.2)
no
0.57
4
GFF2142
Glutathione S-transferase (EC 2.5.1.18)
no
0.56
5
GFF542
no description
no
0.54
6
GFF1588
Serine phosphatase RsbU, regulator of sigma subunit
no
0.53
7
GFF5010
Geranyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.5)
no
0.53
8
GFF3052
Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)
no
0.52
9
GFF4943
Chloride channel protein
no
0.52
10
GFF3197
hypothetical protein
no
0.51
11
GFF1018
23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185)
0.71
0.51
12
GFF3751
Hydroxymethylpyrimidine ABC transporter, transmembrane component
no
0.51
13
GFF2320
16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)
0.68
0.50
14
GFF374
Transcription elongation factor GreA
0.75
0.50
15
GFF1737
Carbon starvation protein A
no
0.49
16
GFF5273
Various polyols ABC transporter, permease protein 1
0.31
0.48
17
GFF2344
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.48
18
GFF126
Repressor homolog
no
0.48
19
GFF405
3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
0.23
0.48
20
GFF1932
no description
no
0.46
Or look for
negative cofitness