Top cofit genes for GFF3640 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Di/tripeptide permease DtpA
SEED: Di/tripeptide permease DtpA
KEGG: proton-dependent oligopeptide transporter, POT family

Rank Hit Name Description Conserved? Cofitness  
1 GFF2341 UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide no 0.59
2 GFF136 FIG002842: hypothetical protein 0.49 0.58
3 GFF4906 Virulence factor VirK no 0.56
4 GFF2888 regulator of length of O-antigen component of lipopolysaccharide chains no 0.56
5 GFF3531 Vitamin B12 ABC transporter, ATPase component BtuD no 0.54
6 GFF103 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) 0.78 0.53
7 GFF1909 Transcriptional regulator, LacI family no 0.53
8 GFF2436 Iron-sulfur cluster regulator IscR no 0.53
9 GFF1059 ABC transporter, ATP-binding protein 0.84 0.52
10 GFF3358 Flagellar basal-body rod protein FlgF 0.73 0.52
11 GFF4352 Cell division trigger factor (EC 5.2.1.8) 0.46 0.52
12 GFF2457 Putative sensor-like histidine kinase YfhK 0.80 0.52
13 GFF4365 ATP-binding component no 0.51
14 GFF1740 Xanthine/uracil/thiamine/ascorbate permease family protein 0.41 0.51
15 GFF1673 Flagellar transcriptional activator FlhD no 0.50
16 GFF1631 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) 0.32 0.50
17 GFF4585 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) 0.72 0.50
18 GFF3883 Colanic acid biosysnthesis protein WcaK no 0.50
19 GFF3052 Transcriptional regulator, IclR family no 0.50
20 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.71 0.50

Or look for negative cofitness