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  • Top cofit genes for PS417_18605 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Cys regulon transcriptional activator CysB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02985 diguanylate cyclase 0.76 0.53
    2 PS417_25970 diguanylate cyclase 0.43 0.43
    3 PS417_26655 chemotaxis protein 0.60 0.38
    4 PS417_11930 hypothetical protein 0.39 0.36
    5 PS417_28070 phosphate ABC transporter ATP-binding protein 0.50 0.36
    6 PS417_15260 protein phosphatase 0.56 0.34
    7 PS417_03990 ligand-gated channel protein no 0.33
    8 PS417_26660 protein PilI 0.66 0.32
    9 PS417_11460 divalent metal cation transporter MntH no 0.31
    10 PS417_28085 phosphate-binding protein 0.68 0.31
    11 PS417_28080 phosphate ABC transporter permease 0.62 0.31
    12 PS417_28075 phosphate ABC transporter permease 0.86 0.31
    13 PS417_04675 deoxyribonuclease 0.81 0.30
    14 PS417_25405 catalase no 0.30
    15 PS417_16390 peroxiredoxin no 0.30
    16 PS417_15075 NAD-glutamate dehydrogenase no 0.30
    17 PS417_00910 diguanylate cyclase 0.65 0.29
    18 PS417_26055 cyclic nucleotide-binding protein no 0.29
    19 PS417_27295 hypothetical protein 0.66 0.29
    20 PS417_12445 6-phosphogluconate dehydrogenase no 0.28

    Or look for negative cofitness