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  • Top cofit genes for GFF3626 from Sphingobium sp. HT1-2

    Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
    SEED: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF248 MBL-fold metallo-hydrolase superfamily no 0.80
    2 GFF3510 hypothetical protein no 0.79
    3 GFF4513 hypothetical protein no 0.76
    4 GFF3816 RNA methyltransferase Atu0341 no 0.75
    5 GFF1899 hypothetical protein no 0.74
    6 GFF4986 hypothetical protein no 0.73
    7 GFF657 hypothetical protein no 0.73
    8 GFF645 Polyhydroxyalkanoic acid synthase no 0.72
    9 GFF2132 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.55 0.72
    10 GFF2143 UPF0118 membrane protein SMc00793 no 0.72
    11 GFF67 hypothetical protein no 0.71
    12 GFF3067 hypothetical protein no 0.71
    13 GFF5127 succinate dehydrogenase cytochrome b subunit family protein no 0.70
    14 GFF2131 Phosphoglycerate kinase (EC 2.7.2.3) no 0.70
    15 GFF3931 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) no 0.70
    16 GFF1155 Carbonic anhydrase, beta class (EC 4.2.1.1) no 0.70
    17 GFF160 hypothetical protein no 0.70
    18 GFF3636 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.70
    19 GFF2036 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) no 0.69
    20 GFF26 hypothetical protein no 0.69

    Or look for negative cofitness