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  • Top cofit genes for GFF3624 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3621 Magnesium and cobalt transport protein CorA no 0.85
    2 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.82
    3 GFF2563 Two-component system sensor histidine kinase no 0.81
    4 GFF649 no description no 0.81
    5 GFF3625 Ferredoxin, 2Fe-2S 0.40 0.79
    6 GFF651 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) no 0.76
    7 GFF4790 Nudix-related transcriptional regulator NrtR 0.48 0.75
    8 GFF3619 no description no 0.74
    9 GFF236 Two-component transcriptional response regulator receiver domain no 0.73
    10 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) no 0.71
    11 GFF3618 Transcriptional regulator, LysR family no 0.67
    12 GFF371 RNA-binding protein YhbY no 0.63
    13 GFF6036 DNA translocase FtsK no 0.62
    14 GFF5209 DUF1854 domain-containing protein no 0.60
    15 GFF2252 RNA-2',3'-PO4:RNA-5'-OH ligase no 0.60
    16 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.59
    17 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.58
    18 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.34 0.56
    19 GFF2730 DNA topoisomerase IV subunit A (EC 5.99.1.3) no 0.55
    20 GFF1526 putative transmembrane sensor no 0.52

    Or look for negative cofitness