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    • Top cofit genes for GFF362 from Sphingobium sp. HT1-2

    Sensory box/GGDEF family protein
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1465 hypothetical protein no 0.80
    2 GFF1180 Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) no 0.80
    3 GFF4557 hypothetical protein no 0.79
    4 GFF4501 Hydrolase, alpha/beta fold family no 0.79
    5 GFF3027 HoxN/HupN/NixA family nickel/cobalt transporter no 0.78
    6 GFF2467 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) / YjbR family protein no 0.78
    7 GFF3477 UPF0758 family protein no 0.77
    8 GFF1921 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) no 0.77
    9 GFF3792 Thiol:disulfide oxidoreductase TlpA no 0.76
    10 GFF1147 Nitrogen regulation protein NtrY (EC 2.7.3.-) no 0.76
    11 GFF2373 hypothetical protein no 0.76
    12 GFF3119 putative sensory transduction regulatory protein no 0.75
    13 GFF60 Pyruvate,phosphate dikinase (EC 2.7.9.1) no 0.75
    14 GFF1998 hypothetical protein no 0.75
    15 GFF4235 hypothetical protein no 0.75
    16 GFF2635 Isocitrate lyase (EC 4.1.3.1) no 0.74
    17 GFF5164 hypothetical protein no 0.74
    18 GFF3670 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) no 0.73
    19 GFF110 Glutamate racemase (EC 5.1.1.3) no 0.73
    20 GFF747 DNA recombination protein RmuC no 0.73

    Or look for negative cofitness