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  • Top cofit genes for GFF3618 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3619 no description no 0.84
    2 GFF3621 Magnesium and cobalt transport protein CorA no 0.82
    3 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.75
    4 GFF236 Two-component transcriptional response regulator receiver domain no 0.74
    5 GFF3625 Ferredoxin, 2Fe-2S no 0.74
    6 GFF2563 Two-component system sensor histidine kinase no 0.70
    7 GFF4790 Nudix-related transcriptional regulator NrtR no 0.69
    8 GFF649 no description no 0.69
    9 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.67
    10 GFF3624 Putative transmembrane protein no 0.67
    11 GFF5080 DNA recombination-dependent growth factor RdgC no 0.66
    12 GFF2152 twitching motility protein PilH no 0.64
    13 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.63
    14 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.63
    15 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.63
    16 GFF371 RNA-binding protein YhbY no 0.63
    17 GFF399 3'-to-5' exoribonuclease RNase R no 0.62
    18 GFF551 Uncharacterized protein Tbd_1903 no 0.62
    19 GFF2380 Protein phosphatase 2C-like no 0.60
    20 GFF5318 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.60

    Or look for negative cofitness