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  • Top cofit genes for GFF3617 from Variovorax sp. SCN45

    Dienelactone hydrolase family protein
    SEED: Dienelactone hydrolase family
    KEGG: carboxymethylenebutenolidase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1932 no description no 0.62
    2 GFF3621 Magnesium and cobalt transport protein CorA 0.44 0.60
    3 GFF3409 Probable lipoprotein signal peptide no 0.57
    4 GFF3618 Transcriptional regulator, LysR family no 0.56
    5 GFF2687 Protein containing domains DUF404, DUF407, DUF403 no 0.54
    6 GFF5209 DUF1854 domain-containing protein no 0.54
    7 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.53
    8 GFF371 RNA-binding protein YhbY no 0.53
    9 GFF6580 CopG domain-containing protein no 0.52
    10 GFF6884 FIG00932717: hypothetical protein no 0.52
    11 GFF2932 Uncharacterized protein YeaG no 0.52
    12 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) no 0.51
    13 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.51
    14 GFF399 3'-to-5' exoribonuclease RNase R 0.40 0.51
    15 GFF4608 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) 0.46 0.51
    16 GFF4337 Electron transfer flavoprotein, alpha subunit no 0.50
    17 GFF6429 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.50
    18 GFF2856 Transcriptional regulator, LysR family no 0.50
    19 GFF4962 Multidrug resistance transporter, Bcr/CflA family no 0.50
    20 GFF7258 Transcriptional regulator, IclR family no 0.49

    Or look for negative cofitness