Top cofit genes for GFF3617 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

LysR-family transcriptional regulator YdhB
SEED: LysR-family transcriptional regulator YdhB

Rank Hit Name Description Conserved? Cofitness  
1 GFF4611 FIG01200701: possible membrane protein no 0.51
2 GFF3543 Electron transfer flavoprotein, alpha subunit no 0.51
3 GFF2937 Uncharacterized ABC transporter, periplasmic component YrbD 0.45 0.50
4 GFF3258 LSU m5C1962 methyltransferase RlmI no 0.49
5 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) no 0.48
6 GFF1587 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) no 0.48
7 GFF4619 hypothetical protein no 0.48
8 GFF1194 DNA replication protein 0.16 0.47
9 GFF3356 Flagellar basal-body rod modification protein FlgD no 0.47
10 GFF4510 Co-activator of prophage gene expression IbrA no 0.46
11 GFF2670 Putative HTH-type transcriptional regulator YjgJ, TetR family no 0.46
12 GFF3358 Flagellar basal-body rod protein FlgF no 0.46
13 GFF3430 Periplasmic lysozyme inhibitor of c-type lysozyme no 0.45
14 GFF4010 Flagellar motor switch protein FliN no 0.44
15 GFF4764 Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) no 0.43
16 GFF1473 Arginine decarboxylase, catabolic (EC 4.1.1.19) no 0.43
17 GFF655 DNA-binding domain of ModE / Molybdate-binding domain of ModE no 0.43
18 GFF2054 putative membrane carboxypeptidase no 0.43
19 GFF4561 FIG002095: hypothetical protein no 0.43
20 GFF2200 Phage CI-like repressor no 0.42

Or look for negative cofitness