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  • Top cofit genes for GFF3616 from Variovorax sp. SCN45

    2-hydroxychromene-2-carboxylate isomerase family protein
    SEED: 2-hydroxychromene-2-carboxylate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3619 no description no 0.78
    2 GFF3621 Magnesium and cobalt transport protein CorA no 0.70
    3 GFF236 Two-component transcriptional response regulator receiver domain 0.49 0.68
    4 GFF3618 Transcriptional regulator, LysR family no 0.67
    5 GFF649 no description no 0.66
    6 GFF3625 Ferredoxin, 2Fe-2S no 0.62
    7 GFF4790 Nudix-related transcriptional regulator NrtR no 0.61
    8 GFF2565 Two-component transcriptional response regulator receiver domain no 0.59
    9 GFF3624 Putative transmembrane protein 0.43 0.58
    10 GFF371 RNA-binding protein YhbY no 0.58
    11 GFF651 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) no 0.57
    12 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) no 0.56
    13 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.55
    14 GFF2152 twitching motility protein PilH no 0.55
    15 GFF4580 hypothetical protein no 0.55
    16 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.54
    17 GFF399 3'-to-5' exoribonuclease RNase R 0.47 0.54
    18 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.36 0.54
    19 GFF5904 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.53
    20 GFF4906 hypothetical protein no 0.53

    Or look for negative cofitness