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Cofit
Protein
Homologs
Top cofit genes for PS417_18485 from
Pseudomonas simiae WCS417
membrane protein
SEED: FIG015373: Membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_18480
permease
0.90
0.40
2
PS417
_16970
membrane protein
no
0.22
3
PS417
_25705
lipoate--protein ligase
no
0.21
4
PS417
_07465
LysR family transcriptional regulator
0.40
0.20
5
PS417
_17510
histidine kinase
no
0.20
6
PS417
_17500
sulfurtransferase
no
0.20
7
PS417
_10110
hypothetical protein
no
0.19
8
PS417
_18720
endonuclease
no
0.19
9
PS417
_06425
exonuclease
no
0.19
10
PS417
_13840
isobutyryl-CoA dehydrogenase (EC 1.3.8.5)
(from data)
no
0.19
11
PS417
_23730
LysR family transcriptional regulator
0.38
0.19
12
PS417
_01180
ribosomal protein S6 modification protein
no
0.19
13
PS417
_16725
hypothetical protein
no
0.19
14
PS417
_21275
GntR family transcriptional regulator
no
0.18
15
PS417
_09325
peptidase S41
no
0.18
16
PS417
_13540
sodium:proton antiporter
no
0.18
17
PS417
_01585
amino acid ABC transporter substrate-binding protein
no
0.18
18
PS417
_22845
membrane protein
no
0.17
19
PS417
_17905
hypothetical protein
no
0.17
20
PS417
_16940
chemotaxis protein CheY
no
0.17
Or look for
negative cofitness